SPEX2 specifications


Unique identifier OMICS_25816
Name SPEX2
Alternative name SPatial gene EXpression pattern EXtractor
Software type Pipeline/Workflow
Interface Command line interface
Restrictions to use None
Output data The spatial locations and strengths of the gene expression.
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Source code URL http://www.sailing.cs.cmu.edu/main/spex2/releasedCode_Spex2.tgz
Maintained Yes


  • Invertebrates
    • Drosophila melanogaster


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  • person_outline Eric Xing <>

Additional information


Publication for SPatial gene EXpression pattern EXtractor

SPEX2 institution(s)
School of Computer Science, Carnegie Mellon University, Pittsburgh, PA, USA
SPEX2 funding source(s)
Supported by National Science Foundation DBI (0640543, 0546594) and Alfred P. Sloan Fellowship.

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