Helps researchers to identify and decipher biologically important information from the datasets. SpinachDB is a database to store assembled and annotated expressed sequence tag (EST) transcripts, predicted metabolic pathways, EST-derived simple sequence repeat (SSR) and single nucleotide polymorphism (SNP) markers. This tool contains the GBrowse map that integrates genome, genes, SSR and SNP markers information; the Blast alignment service; the gene family classification search tool; the orthologous and paralogous gene pairs search tool.
The Protected Horticulture Institute, Shanghai Academy of Agricultural Sciences, Shanghai, China; College of Horticulture, Nanjing Agricultural University, Nanjing, Jiangsu, China
SpinachDB funding source(s)
This work was supported by Natural Science Foundation of Shanghai (15ZR1436700) and Shanghai Science and Technology Talents Project (14XD1425100) and the Scientific Research Project in Public Agricultural Industry (201403032).