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SpliceAid-F | A database of human splicing factors and their RNA-binding sites

Collects into a unique resource several heterogeneous information about splicing regulatory proteins, their binding sites and context-specific activity. Information of binding sites includes the corresponding genes, their genomic coordinates, the splicing effect, the experimental procedures used to assess binding and the related references. All these data have been manually extracted and collected by extensive database and literature screenings, yielding information on 71 splicing proteins, all those investigated so far to our knowledge for which some information is available on their RNA targets.

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SpliceAid-F classification

  • Animals
    • Homo sapiens

SpliceAid-F specifications

Unique identifier:
OMICS_01893
Community driven:
No
User data submission:
Not allowed
Restrictions to use:
None
Data access:
Browse
Maintained:
Yes

SpliceAid-F support

Maintainer

  • Graziano Pesole <>

Credits

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Publications

Institution(s)

Department of Biosciences, Biotechnology and Pharmacological Sciences, University of Bari, Bari, Italy; Department of Specialized Clinical Sciences and Odontostomatology, Polytechnic University of Marche, Ancona, Italy; Consorzio per le Applicazioni di Supercalcolo per Università e Ricerca, Rome, Italy; Institute of Biomembranes and Bioenergetics, Consiglio Nazionale delle Ricerche Bari, Bari, Italy; Department of Biosciences, University of Milan, Milan and 6Center of Excellence in Genomics (CEGBA), Bari, Italy

Funding source(s)

‘Ministero dell’Istruzione, Università e Ricerca’ (MIUR, Italy): ‘PRIN 2009—Large-scale identification and characterization of alternative splicing in the human transcriptome through computational and experimental approaches’; Consiglio Nazionale delle Ricerche: Flagship Project ‘Epigen’, PNR-CNR Aging Program 2012–2014, Italian Research Foundation for amyotrophic lateral sclerosis (AriSLA) and by Italian Ministry for Foreign Affairs (Italy-Israel actions)

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