Spliceman specifications

Information


Unique identifier OMICS_02259
Name Spliceman
Interface Web user interface
Restrictions to use Academic or non-commercial use
Input data A set of DNA sequences with point mutations.
Input format VCF
Output data A ranked list to predict the effects of point mutations on pre-mRNA splicing.
Programming languages Perl, PHP
Database management system PostgreSQL
Computer skills Basic
Version 2.0
Stability Stable
Maintained Yes
Wikipedia https://en.wikipedia.org/wiki/Spliceman

Taxon


  • Primates
    • Homo sapiens
  • Rodents
    • Mus musculus
    • Rattus norvegicus
  • Vertebrates
    • Danio rerio
    • Gallus gallus

Documentation


Maintainer


  • person_outline William Guy Fairbrother <>

Publications for Spliceman

Spliceman institution(s)
Department of Molecular Biology, Cell Biology, and Biochemistry, Brown University, Providence, RI, USA; Center for Computational Molecular Biology, Brown University, Providence, RI, USA; Division of Applied Mathematics, Brown University, Providence, RI, USA; Hassenfeld Child Health Innovation Institute, Brown University, Providence, RI, USA
Spliceman funding source(s)
The National Institute of Health (1R01GM095612-01)

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