SplicePlot specifications

Information


Unique identifier OMICS_02185
Name SplicePlot
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data Gene sequence variations, exons and aligned RNA-seq data
Input format VCF, GTF, BAM, TXT
Output data Plot setting file
Operating system Unix/Linux, Mac OS, Windows
Programming languages Python
Computer skills Advanced
Version 1.1
Stability Stable
Requirements Numpy, Scipy, Matploblib, Pandas, Pysam
Source code URL https://codeload.github.com/wueric/SplicePlot/zip/master
Maintained Yes

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SplicePlot article

SplicePlot institution(s)
Department of Pathology, Stanford University School of Medicine, Stanford, CA, USA
SplicePlot funding source(s)
Edward Mallinckrodt Jr. Foundation

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