Allows user to discover insight in pre-mRNA splicing signals. SplicePort is a data analysis tool for the identification of functional elements. It provides two functions: (i) user can perform accurate splice-site prediction with the flexibility of exploring splice site locations, their score, corresponding sensitivity and false positive rate values and (ii) user can explore the motifs for the requested location in the input sequence and browse the complete collection of identified motifs.
Computer Science Department, University of Maryland, College Park, MD, USA; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD, USA; Department of Cell Biology and Molecular Genetics, University of Maryland, College Park, MD, USA; Center for Bioinformatics and Computational Biology, University of Maryland, College Park, MD, USA
SplicePort funding source(s)
Supported by the National Center for Biotechnology Information (NCBI) Scientific Visitors Program sponsored by the National Library of Medicine and administered by the Oak Ridge Institute for Science and Education, and by the National Science Foundation under grant number 0544309.