SpliceVista statistics

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Associated diseases

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SpliceVista specifications

Information


Unique identifier OMICS_07635
Name SpliceVista
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Python
Computer skills Advanced
Stability Stable
Maintained Yes

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Documentation


Maintainer


  • person_outline Yafeng Zhu <>

Publication for SpliceVista

SpliceVista in publications

 (2)
PMCID: 5765118
PMID: 29323256
DOI: 10.1038/s41598-017-18985-5

[…] identified, 40 of the known components implicated in the major and/or minor splicing pathways according to interactome database (fig.¬†). furthermore, splicing variant analysis was performed by using splicevista (supplementary table¬†), showing the presence of several protein isoforms. proteome mapping was then carried out after ex vivo platelet activation with the known agonists collagen (coll) […]

PMCID: 5012649
PMID: 27598998
DOI: 10.1371/journal.pone.0161914

[…] to 4521 genes were detected, of which 100 genes were also previously identified to have altered splicing (100/194: 51.5%). in order to confirm predicted functional changes caused by as, we used the splicevista program which allows visualization and characterization of spliced protein isoforms. the identification of transcripts-specific peptides confirmed that as modifications in infected cells […]


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