SplitThreader statistics

To access cutting-edge analytics on consensus tools, life science contexts and associated fields, you will need to subscribe to our premium service.

Subscribe
info

Citations per year

Citations chart
info

Popular tool citations

chevron_left Copy number and gene expression data integration chevron_right
Popular tools chart
info

Tool usage distribution map

Tool usage distribution map
info

Associated diseases

Associated diseases

SplitThreader specifications

Information


Unique identifier OMICS_16683
Name SplitThreader
Interface Web user interface
Restrictions to use None
License MIT License
Computer skills Basic
Stability Stable
Maintained Yes

Documentation


Maintainer


  • person_outline Maria Nattestad <>

Information


Unique identifier OMICS_16683
Name SplitThreader
Software type Package/Module
Interface Graphical user interface
Restrictions to use None
Operating system Unix/Linux
License MIT License
Computer skills Medium
Stability Stable
Maintained Yes

Download


Versioning


Add your version

Documentation


Maintainer


  • person_outline Maria Nattestad <>

Publication for SplitThreader

SplitThreader in publication

PMCID: 5834283
PMID: 29541390
DOI: 10.18632/oncotarget.23971

[…] platform parameters with the optional sam attributes enabled. the sam files were used for structural variation analysis using the sniffles tool []. the vcf files from sniffles were finally used with splitthreader (http://splitthreader.com) software to visualize and detect breakpoints. error and coverage analyses were conducted using qualimap []., the sequences of bcr-abl1 genomic junctions […]


To access a full list of publications, you will need to upgrade to our premium service.

SplitThreader institution(s)
Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA; Bard College, Annandale-On-Hudson, NY, USA; Department of Computer Science, Johns Hopkins University, Baltimore, MD, USA; Departments of Computer Science and Biology, Johns Hopkins University, Baltimore, MD, USA
SplitThreader funding source(s)
Supported by NSF[DBI-1350041]; NHGRI[R01-HG006677].

SplitThreader reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review SplitThreader