sppIDer specifications


Unique identifier OMICS_29982
Name sppIDer
Software type Pipeline/Workflow
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Python, R
Computer skills Advanced
Stability Stable
Maintained Yes




No version available


  • person_outline Chris Hittinger

Publication for sppIDer

sppIDer institution(s)
Laboratory of Genetics, J. F. Crow Institute for the Study of Evolution, Genome Center of Wisconsin, University of Wisconsin-Madison, Madison, WI, USA; Wisconsin Energy Institute, University of Wisconsin-Madison, Madison, WI, USA; DOE Great Lakes Bioenergy Research Center, University of Wisconsin-Madison, Madison, WI, USA; Department of Food Biotechnology, Institute of Agrochemistry and Food Technology (IATA), CSIC, Valencia, Spain
sppIDer funding source(s)
Supported by the National Science Foundation under Grant Nos. DGE-1256259 (Graduate Research Fellowship) and DEB-6351253634, the Robert Draper Technology Innovation Fund from the Wisconsin Alumni Research Foundation, the USDA National Institute of Food and Agriculture under Hatch Project 1003258, in part by the DOE Great Lakes Bioenergy Research Center (DOE BER Office of Science DE-SC0018409 and DE-FC02-07ER64494), the Predoctoral Training Program in Genetics, (National Institutes of Health 5T32GM007133), Marie Sklodowska-Curie fellow of the European Union’s Horizon 2020 research and innovation programme, grant agreement No. 642747775, the Pew Charitable Trusts and the Vilas Trust Estate.

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