SprayQc pipeline

SprayQc specifications

Information


Unique identifier OMICS_08216
Name SprayQc
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Maintained Yes

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Publication for SprayQc

SprayQc IN pipelines

 (3)
2015
PMCID: 4453069
PMID: 25912046
DOI: 10.1093/gbe/evv074

[…] was 70,000 for full scans and 7,500 for fragments (both specified at m/z 400). ion target values were 1e6 and 5e4 ms, respectively. exclusion time was 20 s. sample runs were monitored using the sprayqc quality monitoring system (scheltema and mann 2012). raw files were processed using the andromeda search engine-based version 1.4.1.12 of maxquant (http://www.maxquant.org/, last accessed may […]

2015
PMCID: 4633127
PMID: 26536128
DOI: 10.1371/journal.pone.0140100

[…] for full scans and 17,500 for fragments (both specified at m/z 400). ion target values were 1e6 and 5e4ms, respectively. dynamic exclusion time was 20 sec or 10 sec. ms runs were monitored using the sprayqc quality monitoring system [41]. raw files were processed using the andromeda search engine-based version 1.5.0.8 of maxquant (http://www.maxquant.org/) with enabled second peptide, ibaq, […]

2015
PMCID: 4666066
PMID: 26628892
DOI: 10.1186/s12953-015-0086-1

[…] was 70,000 for full scans and 17,500 for fragments (both specified at m/z 200). ion target values were 1e6 and 5e4ms, respectively. dynamic exclusion time was 20┬ás. ms runs were monitored using the sprayqc quality monitoring system [61]. raw files were processed using the andromeda search engine-based version 1.5.1.6 of maxquant (http://www.biochem.mpg.de/5111795/maxquant) with enabled second […]

SprayQc institution(s)
Department of Proteomics and Signal Transduction, Max-Planck Institute of Biochemistry, Martinsried, Germany

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