SPRING specifications

Information


Unique identifier OMICS_13801
Name SPRING
Interface Web user interface
Restrictions to use None
Input data A table of expression measurements
Output data A k-nearest-neighbor (knn) graph
Computer skills Basic
Stability Beta
Maintained Yes

Maintainer


  • person_outline Allon Klein

Additional information


https://github.com/AllonKleinLab/SPRING

Information


Unique identifier OMICS_13801
Name SPRING
Software type Application/Script
Interface Command line interface
Restrictions to use None
Input data An expression matrix, a distance matrix, a gene color/color data all gene, a graph data and a color stats
Input format CSV, JSON
Operating system Unix/Linux
Programming languages MATLAB, Python
Computer skills Advanced
Stability Stable
Maintained Yes

Download


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Versioning


No version available

Maintainer


  • person_outline Allon Klein

Additional information


https://github.com/AllonKleinLab/SPRING

Publication for SPRING

SPRING institution(s)
Department of Systems Biology, Harvard Medical School, Boston, MA, USA
SPRING funding source(s)
This work was supported by the National Institute of Health (grant n°5T32GM080177-07), the BurroughsWellcome Career Award at the Scientific Interface and the Edward J Mallinckrodt Foundation Fellowship.

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