SPRINT specifications

Information


Unique identifier OMICS_19825
Name SPRINT
Alternative name SNP-free RNA editing IdeNtification Toolkit
Software type Application/Script, Package/Module
Interface Command line interface
Restrictions to use None
Input data Some reads.
Input format BAM, FASTQ
Operating system Unix/Linux
Programming languages Python
Computer skills Advanced
Version 0.1.7
Stability Stable
Requirements BWA, samtools
Maintained Yes

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Documentation


Maintainers


  • person_outline Weidong Tian <>
  • person_outline Feng Zhang <>

Publication for SNP-free RNA editing IdeNtification Toolkit

SPRINT institution(s)
State Key Laboratory of Genetic Engineering and Collaborative Innovation Center for Genetics and Development, Shanghai, China; Department of Biostatistics and Computational Biology, School of Life Sciences, Fudan University, Shanghai, China; The Molecular Genetic Diagnosis Center, Shanghai Key Lab of Birth Defect, Translational Medicine Research Center of Children Development and Diseases, Pediatrics Research Institute, Children’s Hospital of Fudan University, Shanghai, China; Children’s Hospital of Fudan University, Shanghai, China; Institutes of Biomedical Sciences, Fudan University, Shanghai, China
SPRINT funding source(s)
Supported by the National Natural Science Foundation of China [31671367, 31471245]; the Shanghai Municipal Commission of Science and Technology Program [14DJ1400100]; the National Key Research and Development Program of China [2016YFC1000505]; the Specialized Research Fund for the Doctoral Program of Higher Education of China [20120071110018]; the Innovation Program of Shanghai Municipal Education Commission [13ZZ006]; Shanghai Shuguang Program [13SG05].

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