SPRINT specifications
Information
Unique identifier | OMICS_19825 |
---|---|
Name | SPRINT |
Alternative name | SNP-free RNA editing IdeNtification Toolkit |
Software type | Application/Script, Package/Module |
Interface | Command line interface |
Restrictions to use | None |
Input data | Some reads. |
Input format | BAM, FASTQ |
Operating system | Unix/Linux |
Programming languages | Python |
Computer skills | Advanced |
Version | 0.1.7 |
Stability | Stable |
Requirements |
BWA, samtools
|
Maintained | Yes |
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Maintainers
- person_outline Weidong Tian <>
- person_outline Feng Zhang <>
Publication for SNP-free RNA editing IdeNtification Toolkit
2017 Bioinformatics
PMCID: 5870768
PMID: 29036410
DOI: 10.1093/bioinformatics/btx473
SPRINT institution(s)
State Key Laboratory of Genetic Engineering and Collaborative Innovation Center for Genetics and Development, Shanghai, China; Department of Biostatistics and Computational Biology, School of Life Sciences, Fudan University, Shanghai, China; The Molecular Genetic Diagnosis Center, Shanghai Key Lab of Birth Defect, Translational Medicine Research Center of Children Development and Diseases, Pediatrics Research Institute, Children’s Hospital of Fudan University, Shanghai, China; Children’s Hospital of Fudan University, Shanghai, China; Institutes of Biomedical Sciences, Fudan University, Shanghai, China
SPRINT funding source(s)
Supported by the National Natural Science Foundation of China [31671367, 31471245]; the Shanghai Municipal Commission of Science and Technology Program [14DJ1400100]; the National Key Research and Development Program of China [2016YFC1000505]; the Specialized Research Fund for the Doctoral Program of Higher Education of China [20120071110018]; the Innovation Program of Shanghai Municipal Education Commission [13ZZ006]; Shanghai Shuguang Program [13SG05].
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