SQUID specifications


Unique identifier OMICS_19970
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS
Programming languages C++
License BSD 3-clause “New” or “Revised” License
Computer skills Advanced
Version 1.4
Stability Stable
Maintained Yes



Add your version



  • person_outline Carl Kingsford <>

Publication for SQUID

SQUID institution(s)
Computational Biology Department, School of Computer Science, Carnegie Mellon University, Pittsburgh, PA, USA
SQUID funding source(s)
Supported by the Gordon and Betty Moore Foundation’s Data-Driven Discovery Initiative through Grant GBMF4554, by the US National Science Foundation (CCF-1256087, CCF-1319998) and by the US National Institutes of Health (R21HG006913, R01HG007104), and by the Curci Foundation, an Alfred P. Sloan Research Fellow, and a grant (#4100070287) with the Pennsylvania Department of Health.

SQUID reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review SQUID