SSPACE-LongRead specifications
- Unique identifier:
- OMICS_04686
- Interface:
- Command line interface
- Biological technology:
- Pacific Biosciences
- Programming languages:
- C++, Perl
- Stability:
- Stable
- Software type:
- Package/Module
- Restrictions to use:
- Academic or non-commercial use
- Operating system:
- Unix/Linux
- Computer skills:
- Advanced
- Maintained:
- Yes
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SSPACE-LongRead support
Maintainer
- SSPACE-LongRead <>
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Publications
-
(Boetzer and Pirovano, 2014)
SSPACE-LongRead: scaffolding bacterial draft genomes using long read sequence information.
BMC Bioinformatics.
PMID: 24950923 DOI: 10.1186/1471-2105-15-211
Institution(s)
BaseClear BV, Genome analysis and technology department, Leiden, Netherlands
Funding source(s)
This research was partially funded by the WBSO (BaseClear grant SO201305).
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1 user review
1 user review
Too slow (very very very) at the last writing step.
But there are no choice.
