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SSR_pipeline

A Bioinformatic Infrastructure for Identifying Microsatellites From Paired-End Illumina High-Throughput DNA Sequencing Data. All modules are implemented in the Python programming language and can therefore be used from nearly any computer operating system (Linux, Macintosh, and Windows).

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SSR_pipeline classification

SSR_pipeline specifications

Software type:
Package/Module
Restrictions to use:
None
Programming languages:
Python
Stability:
Stable
Interface:
Command line interface
Operating system:
Unix/Linux, Mac OS, Windows
Computer skills:
Advanced
Maintained:
Yes

SSR_pipeline distribution

versioning

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No versioning.

SSR_pipeline support

Maintainer

  • Mark P. Miller <>

Credits

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Publications

Institution(s)

the US Geological Survey, Forest and Rangeland Ecosystem Science Center, Corvallis, OR

Link to literature

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