STAMP pipeline

STAMP specifications

Information


Unique identifier OMICS_02625
Name STAMP
Alternative name Statistical Analysis of Metagenomic Profiles
Software type Package/Module
Interface Graphical user interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages Python
License GNU General Public License version 2.0
Computer skills Medium
Version 2.0.9
Stability Stable
Maintained Yes

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Maintainer


  • person_outline Donovan H. Parks <>

Publications for Statistical Analysis of Metagenomic Profiles

STAMP citation

2016
PMCID: 5047465

[…] of the contigs in each of the samples (in each dataset) were first obtained using discribinate [63]. the taxonomic profiles of each sample (in the different datasets) were then compared by pca using stamp [64]. it was observed that the samples from different datasets clustered together with no significant biases in any of the components (s19 fig)., homologues of xenobiotic metabolizing enzymes […]

STAMP institution(s)
Australian Centre for Ecogenomics, School of Chemistry and Molecular Biosciences, The University of Queensland, St Lucia, QLD, Australia

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