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Self-transcribing active regulatory region sequencing data analysis software tools

STARR-seq is a massively parallel reporter assay to identify transcriptional enhancers directly based on their activity in entire genomes and to assess their activity quantitatively. Enhancer activity is directly linked to the underlying DNA sequence and measured as presence of the resulting reporter transcripts among cellular RNA by deep sequencing.

Source text:
(Muerdter et al., 2015) STARR-seq — Principles and applications. Genomics.

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