Stemloc-AMA statistics

To access cutting-edge analytics on consensus tools, life science contexts and associated fields, you will need to subscribe to our premium service.


Citations per year

Citations chart

Popular tool citations

chevron_left Multiple nucleotide sequence alignment chevron_right
Popular tools chart

Tool usage distribution map

Tool usage distribution map

Associated diseases

Associated diseases

Stemloc-AMA specifications


Unique identifier OMICS_03742
Name Stemloc-AMA
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Maintained Yes


Add your version

Publication for Stemloc-AMA

Stemloc-AMA in publication

PMCID: 2725318
PMID: 19714212
DOI: 10.1371/journal.pcbi.1000483

[…] structure, given phylogeny, descendant structures and correct model); stemloc (a greedy ml heuristic, ignoring phylogeny in favor of a single-linkage clustering of the descendant structures); stemloc-ama (a posterior-decoding heuristic, maximizing the alignment's expected accuracy rather than its likelihood); and handel (ml alignment under various indel models that ignore secondary […]

To access a full list of publications, you will need to upgrade to our premium service.

Stemloc-AMA institution(s)
Biophysics Graduate Group, Department of Mathematics and Department of Bioengineering, University of California, Berkeley, CA, USA

Stemloc-AMA reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review Stemloc-AMA