STRAP protocols

STRAP specifications

Information


Unique identifier OMICS_03657
Name STRAP
Alternative name STRuctural Alignments of Proteins
Software type Package/Module
Interface Graphical user interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Java
License GNU General Public License version 2.0
Computer skills Medium
Stability Stable
Maintained Yes

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Maintainer


  • person_outline Christoph Gille <>

Publications for STRuctural Alignments of Proteins

STRAP IN pipelines

 (2)
2011
PMCID: 3155347
PMID: 21845074
DOI: 10.3390/ijms12074214

[…] the crystal structure of other mammalian hsps using predict dalilite server with a pairwise comparison between two proteins structures at a time. the heuristic algorithm was used to describe random structural alignments of proteins with different folds and reasonable accuracy [57]., we believe that the hspa6 in the arabian camel probably play similar roles to the other reported hspa6 proteins […]

2010
PMCID: 2816704
PMID: 20140205
DOI: 10.1371/journal.pone.0009071

[…] aligned pair-wise with the crystal structures of cole9 (pdb: 1v14), i-hmui (pdb: 1u3e), hpy99i (pdb: 3gox) and the kpni model built by nagaraja and colleagues [36] using the tm-align module [78] of strap [79]., we thank rich roberts, bill jack, and elisabeth raleigh for critical comments and discussions; barry stoddard for informing us of the hpyav homologs; jim ellard and don comb for support […]

STRAP institution(s)
Institute for Biochemistry, Charité University Hospital, Humboldt University Berlin, Germany

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