Struct I/O Lasso specifications

Information


Unique identifier OMICS_25812
Name Struct I/O Lasso
Alternative name Structured Input Output Lasso
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages MATLAB
Computer skills Advanced
Stability Beta
Source code URL http://www.sailing.cs.cmu.edu/main/epistaticQTL/src_package_beta.zip
Maintained Yes

Versioning


No version available

Maintainer


  • person_outline Eric Xing

Publication for Structured Input Output Lasso

Struct I/O Lasso citation

library_books

Integrative regression network for genomic association study

2016
BMC Med Genomics
PMCID: 4989890
PMID: 27535739
DOI: 10.1186/s12920-016-0192-7

[…] portant genes in common pathways of interest. For problems, such as grouped covariates, this method can impose sparse effect on the group level and within the group level. The more recently described Structured Input–output Lasso (SIOL) method combines structural constraints on both the inputs and the outputs []. Similar to GFLasso, this method considers output structural information, and similar […]

Struct I/O Lasso institution(s)
School of Computer Science, Carnegie Mellon University, Pittsburgh, PA, USA
Struct I/O Lasso funding source(s)
Supported by NIH 1 R01 GM087694-01; NIH 1RC2HL101487-01 (ARRA); AFOSR FA9550010247; ONR N0001140910758; NSF Career DBI0546594; NSF IIS-0713379; and Alfred P. Sloan Fellowship.

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