SQANTI specifications

Unique identifier:
OMICS_26086
Software type:
Pipeline/Workflow
Restrictions to use:
None
Programming languages:
Python
Computer skills:
Advanced
Maintained:
Yes
Name:
Structural and Quality Annotation of Novel Transcript Isoforms
Interface:
Command line interface
Operating system:
Unix/Linux
License:
MIT License
Stability:
Stable

versioning

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SQANTI distribution

download

SQANTI support

Maintainer

  • A Conesa <>

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Credits

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Publications

Institution(s)

Department of Microbiology and Cell Science, Institute for Food and Agricultural Sciences, University of Florida, Gainesville, FL, USA; Genomics of Gene Expression Laboratory, Centro de Investigaciones Principe Felipe (CIPF), Valencia, Spain; Neural Regeneration Laboratory, CIPF, Valencia, Spain; Department of Developmental and Cell Biology, University of California, Irvine, CA, USA; VIB-UGent Center for Medical Biotechnology, VIB, Ghent, Belgium; Department of Biochemistry, Ghent University, Ghent, Belgium; Centro Nacional de Investigaciones Cardiovasculares CNIC, Madrid, Spain; Centro Nacional de Investigaciones Oncologicas CNIO, Madrid, Spain; RNA transport and metabolism Laboratory, CIPF, Valencia, Spain

Funding source(s)

This work has been partially funded by the University of Florida Pre-eminence hires program, the Spanish Ministry of Economy and Competitiveness grant BIO2015-71658-R and Spanish Ministry of Education grant FPU2013/02348.

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