SV-AUTOPILOT specifications

Unique identifier:
OMICS_18925
Software type:
Pipeline/Workflow
Restrictions to use:
None
Programming languages:
Python
Stability:
Stable
Name:
Structural Variation AUTOmated PIpeLine Optimization Tool
Interface:
Command line interface
Operating system:
Unix/Linux
Computer skills:
Advanced
Maintained:
Yes

versioning

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SV-AUTOPILOT distribution

download

SV-AUTOPILOT support

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Credits

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Publications

Institution(s)

Sequencing Analysis Support Core, Leiden University Medical Center, Leiden, Netherlands; Center for Bioinformatics, Saarland University, Saarbrücken, Germany; Max Planck Institute for Informatics, Saarbrücken, Germany; Centrum Wiskunde and Informatica, Amsterdam, Netherlands; Animal Breeding and Genomics Centre, Wageningen University, Wageningen, Netherlands; University of Fribourg and Swiss Institute of Bioinformatics, Fribourg, Switzerland; Weizmann Institute of Science, Rehovot, Israel

Funding source(s)

Supported by EU FP7 ALLBIO project, grant number 289452; the Dutch national e-infrastructure with the support of SURF Foundation; the TraIT project (grant 05 T-401) within the framework of the Center for Translational Molecular Medicine (CTMM); The European Research Council under the European Community’s Seventh Framework Program (FP7/2007-2013)/ERC Grant agreement no 249894 (SelSweep project); the Nederlandse Organisatie voor Wetenschappelijk Onderzoek (NWO), through Vidi grant 639.072.309; and the EU: Cost Action BM1006: NGS Data Analysis Network.

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