Main logo
?
tutorial arrow
×
Create your own tool library
Bookmark tools and put favorites into folders to find them easily.

Structure SNP StSNP

Provides practical, user friendly access to the wealth of information related to nsSNPs by seamlessly connecting various databases into one pipeline. Key functional and structural information along with known pathways the proteins are involved in, have all been linked together to provide users some advantages when compared to other current resources: (a) the sequence, structure and pathway information have all been cross-referenced, which enables a user to quickly query and visualize the inter-related nsSNP data; (b) a graphical display of the nsSNPs provides a user with the location of the nsSNP(s) in terms of primary sequence, and whether such nsSNP(s) can be modeled; (c) the modeling options provide the user with a choice of which nsSNP to map and visualize which nsSNPs could potentially have deleterious effects on a protein's function; (d) the modeled protein structures are automatically loaded in Friend, where they can be easily viewed, compared and analyzed; (e) finally, StSNP will be updated on a regular basis following the updates on the major sources, dbSNP, PDB, KEGG and others.

User report

tutorial arrow
×
Vote up tools and offer feedback
Give value to tools and make your expertise visible
Give your feedback on this tool
Sign up for free to join and share with the community

0 user reviews

0 user reviews

No review has been posted.

StSNP forum

tutorial arrow
×
Communicate with other users
Participate in the forum to get support for using tools. Ask questions about technical specifications.
Take part in the discussion
Sign up for free to ask question and share your advices

No open topic.

StSNP classification

  • Animals
    • Homo sapiens

StSNP specifications

Interface:
Web user interface
Computer skills:
Basic
Stability:
Stable
Restrictions to use:
None
Version:
1.1
Maintained:
Yes

StSNP distribution

StSNP support

Maintainer

  • Valentin Ilyin <>

Credits

tutorial arrow
×
Promote your skills
Define all the tasks you managed and assign your profile the appropriate badges. Become an active member.
Promote your work
Sign up for free to badge your contributorship

Publications

Institution(s)

Department of Biology, Northeastern University, Boston, MA, USA

Link to literature

By using OMICtools you acknowledge that you have read and accepted the terms of the end user license agreement.