Structure Surfer specifications
Information
| Unique identifier | OMICS_11815 |
|---|---|
| Name | Structure Surfer |
| Restrictions to use | None |
| Database management system | MySQL |
| Community driven | No |
| Data access | File download, Browse |
| User data submission | Not allowed |
| Maintained | Yes |
Taxon
-
Primates
- Homo sapiens
-
Rodents
- Mus musculus
Maintainer
- person_outline Brian D. Gregory
Publication for Structure Surfer
library_books
A comprehensive database of high-throughput sequencing-based RNA secondary structure probing data (Structure Surfer)
2016 BMC Bioinformatics
PMCID: 4869249
PMID: 27188311
DOI: 10.1186/s12859-016-1071-0
Structure Surfer institution(s)
Department of Biology, University of Pennsylvania, Philadelphia, PA, USA; Genomics and Computational Biology Graduate Group, Philadelphia, USA; Cell and Molecular Biology Graduate Group, Philadelphia, USA; Department of Pathology and Laboratory Medicine, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA; Department of Computer Engineering, Antalya International University, Antalya, Turkey; Institute on Aging, Baltimore, MD, USA; Penn Center for Bioinformatics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA
Structure Surfer funding source(s)
The NSF (Career Award MCB-1053846, MCB-1243947, and IOS-1444490); the National Institute of General Medical Sciences (R01-GM099962 and NIGMS 5T32GM008216-26); EU FP7 Marie Curie CIG grant (631986); U24-AG041689 funds
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