STRUM pipeline

STRUM specifications

Information


Unique identifier OMICS_12201
Name STRUM
Alternative name STRUcture Modeling
Software type Package/Module
Interface Graphical user interface
Restrictions to use None
Input data Either [10,1500] residues sequence or experimental structure
Input format Fasta or PDB
Operating system Unix/Linux
Computer skills Medium
Stability Stable
Maintained Yes

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Maintainer


  • person_outline Yang Zhang <>

Information


Unique identifier OMICS_12201
Name STRUM
Alternative name STRUcture Modeling
Interface Web user interface
Restrictions to use None
Input data Either [10,1500] residues sequence or experimental structure
Input format Fasta or PDB
Computer skills Basic
Stability Stable
Maintained Yes

Maintainer


  • person_outline Yang Zhang <>

Publication for STRUcture Modeling

STRUM IN pipeline

2017
PMCID: 5330499
PMID: 28245269
DOI: 10.1371/journal.pone.0172848

[…] fungal type i polyketides compounds are biosynthesized by multi-domain enzymes, which employ an iterative strategy to build polyketide molecules [10]., functional annotation and comparative 3d structure modeling and tertiary structure analysis of ketosynthase domain of pks gene were generated ‘in silico’ (fig 4).the predicted structure of the pks protein sequence revealed its primary […]

STRUM institution(s)
School of Computer Science and Technology, Soochow University, Suzhou, China; Department of Computational Medicine and Bioinformatics, Ann Arbor, MI, USA; Collaborative Innovation Center of Novel Software Technology and Industrialization, Nanjing, Jiangsu, China; Department of Biological Chemistry, Ann Arbor, MI, USA
STRUM funding source(s)
Supported in part by the National Institute of General Medical Sciences (GM083107, GM116960), the China Scholarship Council Award (No.201406920033), and the National Natural Science Foundation of China (No.61170125)

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