STRViper specifications

Information


Unique identifier OMICS_02177
Name STRViper
Alternative name Short Tandem Repeat Variation Identification from Paired-End Reads
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input format BAM,SAM,VCF
Output format BAM
Operating system Unix/Linux, Mac OS, Windows
Programming languages Java
Computer skills Advanced
Stability Stable
Maintained Yes

Versioning


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Maintainers


  • person_outline Minh Duc Cao <>
  • person_outline Mikael Bodén <>

Publication for Short Tandem Repeat Variation Identification from Paired-End Reads

STRViper institution(s)
School of Chemistry and Molecular Biosciences, The University of Queensland, Brisbane, St Lucia, QLD, Australia; Clayton School of Information Technology, Monash University, Clayton, VIC, Australia; School of Biological Sciences, Monash University, Melbourne, VIC, Australia; Advanced Water Management Centre, The University of Queensland, QLD, Australia
STRViper funding source(s)
Supported by National Health and Medical Research Council (NHMRC) Project Grant [1004112], Australian Research Council (ARC) Discovery Project [DP1095325], ARC Australian Postdoctoral Fellowship [DP110100964] and ARC Future Fellowship [FT100100377].

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