A knowledge-based portal with gene-centric expression profiles based on the annotation of several antibodies towards the same protein target. Because all the data on the Human Protein Atlas are publicly available, the information can be integrated into other databases. The availability of the annotated expression patterns opens up the possibility for a community-based dialog to provide input by researchers with specialized knowledge about particular protein targets.
Provides a large number of images and their associated metadata for many proteins across multiple organisms. YRC PIR is a database of fluorescence microscopy images. It allows researchers to find, view, and download many images and associated metadata depicting the subcellular localization and co-localization of proteins.
Maps validated gene and protein expression, phenotype and images related to cell types. The data allow characterization and comparison of cell types and can be browsed by using the body browser and by searching for cells or genes. All cells are related to more complex systems such as tissues, organs and organisms and arranged according to their position in development. CellFinder provides long-term data storage for validated and curated primary research data and provides additional expert-validation through relevant information extracted from text.
It is both a web service providing access to collections of images showing subcellular location patterns and an open-source image database software system. There are two main collections: the original Public database containing various small image sets useful for training and testing various automated analysis approaches, and the RandTag database containing images of NIH 3T3 clones expressing randomly-tagged proteins.
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