SuccinSite specifications

Information


Unique identifier OMICS_12576
Name SuccinSite
Interface Web user interface
Restrictions to use None
Input data Protein sequence(s)
Input format FASTA
Computer skills Basic
Stability Stable
Maintained Yes

Documentation


Maintainer


  • person_outline Md. Mehedi Hasan <>

Publication for SuccinSite

SuccinSite in publications

 (2)
PMCID: 5809022
PMID: 29432431
DOI: 10.1371/journal.pone.0191900

[…] the k-nearest neighbors strategy and hypothetical training samples in an attempt to ameliorate the imbalance between classes. subsequently, a random forest algorithm was designed for prediction. succinsite also regarded a random forest classifier but with informative encoding features, such as the composition of k-spaced amino acid pairs, binary encoding and specific physicochemical […]

PMCID: 5584904
PMID: 28894368
DOI: 10.2147/IJN.S140875

[…] time-consuming, and laborious. in silico approach, on the other hand, is potentially an alternative strategy to predict succinylation substrates. in this paper, a novel computational predictor succinsite2.0 was developed for predicting generic and species-specific protein succinylation sites. this predictor takes the composition of profile-based amino acid and orthogonal binary features, […]


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SuccinSite institution(s)
State Key Laboratory of Agrobiotechnology, College of Biological Sciences, China Agricultural University, Beijing, China; Laboratory of Bioinformatics, Department of Statistics, University of Rajshahi, Rajshahi, Bangladesh
SuccinSite funding source(s)
Chinese Scholarship Council (CSC); a recipient of Higher Education Quality Enhancement Project (CP-3603, W2-R3)

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