survminer statistics

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Associated diseases

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survminer specifications

Information


Unique identifier OMICS_19772
Name survminer
Software type Package/Module
Interface Command line interface
Restrictions to use Academic or non-commercial use
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License GNU General Public License version 2.0
Computer skills Advanced
Version 0.4.0
Stability Stable
Requirements
ggplot2, ggpubr
Maintained Yes

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Maintainer


  • person_outline Alboukadel Kassambara <>

survminer in pipeline

2018
PMCID: 5743717
PMID: 29290775
DOI: 10.7150/jca.21925

[…] average was subjected to analysis and visualized by complexheatmap package in r. kaplan-meier (km) survival curve analysis and cox proportional hazards analysis were performed and visualized using survminer and survival package in r. biopsy samples with mrna expression of the indicated ieg above average were classified as “high exp” group. the remaining samples were classified as “low exp” […]


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survminer in publications

 (31)
PMCID: 5943456
PMID: 29743479
DOI: 10.1038/s41467-018-04283-9

[…] moment correlation coefficient and test for significant deviation from no correlation. plotting of tcga data was performed using the ggplot2 r package. survival analysis was performed using the survminer and survival r packages. kaplan–meier estimated survival curves were constructed using the tcga clinical data. statistical testing of differences between survival curves used the g-rho […]

PMCID: 5920102
PMID: 29700384
DOI: 10.1038/s41598-018-25019-1

[…] the effect of including each prediagnosis interval on prognosis predictions (suppl. methods). all statistical analyses were performed using r (version 1.0.136) and built-in r packages (dplyr, survminer, survival, rocr)., prognosis predictions of patients utilizing the postdiag ag400 model were also conducted in an effort to emulate previous single time-point measurement studies […]

PMCID: 5899147
PMID: 29654229
DOI: 10.1038/s41467-018-03731-w

[…] as mean and sd, except otherwise indicated. results were analyzed by unpaired two-tailed student’s t tests using the r programming language. kaplan–meier survival curve were produced using the “survminer” r package and p values were generated using the log-rank statistic. box-plots were made with the “ggplot2” r package. drug dose response curves were produced with graphpad prism., […]

PMCID: 5893829
PMID: 29670856
DOI: 10.3389/fonc.2018.00095

[…] performed using a two-sided significance level of 0.05. r version 3.4.1 and the following r packages were used to perform all data visualization and statistical analyses: “ggplot2,” “survival,” “survminer,” “interval,” and “mice” (–)., we identified 401 patients under age 80 with hpv-negative head and neck cancer. of these 401 patients, 146 (36.4%) exhibited cdkn2a copy number loss. […]

PMCID: 5907722
PMID: 29615097
DOI: 10.1186/s13062-018-0207-8

[…] []. the autoencoder network is implemented in keras (v. 2.1.3) []. cox regression and survival analyses were performed in the r statistical environment (v. 3.3.3) [] using the survival and survminer libraries. plots were produced using the ggplot2 r package. the dap and inf were run on a 32-core intel xeon linux workstation. dl computations were run on a microsoft azure platform […]


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survminer review

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Minesh Jethva

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Incorrect download link.