SurvNet statistics

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Associated diseases

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SurvNet specifications

Information


Unique identifier OMICS_04212
Name SurvNet
Interface Web user interface
Restrictions to use Academic or non-commercial use
Input data A biological network file, a molecular profiling file and a patient survival data file.
Output data A user-friendly display of network-based biomarkers.
License GNU Affero General Public License version 3
Computer skills Basic
Stability Stable
Maintained Yes

Maintainer


  • person_outline Han Liang <>

Additional information


http://bioinformatics.mdanderson.org/SurvNet/faq.html

Publication for SurvNet

SurvNet in publications

 (16)
PMCID: 5861592
PMID: 29560856
DOI: 10.2807/1560-7917.ES.2018.23.11.17-00042

[…] gaps in surveillance and case management., we used case-based national tb notification data from germany, reported to the robert koch institute (rki) through the electronic reporting system survnet@rki []. date of data extraction was 1 march 2016. , we included in our analysis pulmonary tb cases notified between 2002 and 2014 with available information on age and sex (total n = 52,995). […]

PMCID: 5743097
PMID: 29258650
DOI: 10.2807/1560-7917.ES.2017.22.50.17-00196

[…] personal communication, wolfgang rabsch, october 2016 and []., in 2014, 91 bavarian cases of salmonella enteritidis pt 14b were notified according to the german infection protection act (survnet-database of rki, as at 31 march 2015). ten of them were asymptomatic carriers, among whom one was an employee of company x. all bavarian cases were sporadic, singular cases […]

PMCID: 5699808
PMID: 29166403
DOI: 10.1371/journal.pone.0188356

[…] via the state health department to the robert koch institute (rki), germany’s national public health institute., anonymous case-based tb notification data from rki’s notifiable diseases database, survnet@rki, were used (export date: 30 august 2011). the key variables included age, sex, country of birth, and multidrug resistance status []., molecular typing of tb isolates was performed […]

PMCID: 5457677
PMID: 28442750
DOI: 10.1038/emi.2017.11

[…] link (for example, a confirmed or assumed identical source of infection)., all hepatitis a cases notified between september 2015 and march 2016 were extracted from the national surveillance database survnet and transferred to microsoft excel for data management. we employed graphpad prism for basic statistical procedures and graphical presentation. when comparing multiple groups and gaussian […]

PMCID: 5234003
PMID: 28084428
DOI: 10.1038/srep40680

[…] cases., all sporadic and outbreak-related cases reported to rki in the period of 1 january 2001 until 31 december 2015 according to the protection against infection act were included (datasource: “survnet@rki”, accessed 29.01.2016). all cases fulfilled one of the rki reference definitions:cases with the clinical picture defined as redness of the conjunctiva and with laboratory confirmation […]


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SurvNet institution(s)
Chinese Academy of Sciences Key Laboratory of Computational Biology, Chinese Academy of Sciences and Max Planck Society (CAS-MPG) Partner Institute for Computational Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai, China; Department of Bioinformatics and Computational Biology, The University of Texas MD Anderson Cancer Center, Houston, TX, USA; Division of Quantitative Sciences, The University of Texas MD Anderson Cancer Center, Houston, TX, USA
SurvNet funding source(s)
Supported by the University of Texas MD Anderson Cancer Center, the National Institutes of Health [U24 CA143883 and P30 CA016672]; Hogan Gastrointestinal Research fund and the Lorraine Dell Program in Bioinformatics for Personalization of Cancer Medicine.

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