SUTTA specifications

Information


Unique identifier OMICS_00034
Name SUTTA
Alternative name Scoring-and-Unfolding Trimmed Tree Assembler
Software type Package/Module
Interface Command line interface
Restrictions to use Academic or non-commercial use
Operating system Unix/Linux
Computer skills Advanced
Stability No
Maintained No

Versioning


No version available

Publication for Scoring-and-Unfolding Trimmed Tree Assembler

SUTTA citation

library_books

Feature by Feature – Evaluating De Novo Sequence Assembly

2012
PLoS One
PMCID: 3272011
PMID: 22319599
DOI: 10.1371/journal.pone.0031002

[…] on all the feature space () and on the ICA-feature space (). In the first case, we see how, rather surprisingly, TIGR now behaves much worse than all other assemblers, while PCAP, MINIMUS, CABOG and SUTTA have comparable performances. It is surprising that TIGR performs worse than MINIMUS, which does not use the important information, available in paired reads. Inspecting these two assemblies clo […]

SUTTA institution(s)
Courant Institute of Mathematical Sciences, New York University, New York, NY, USA; NYU School of Medicine, New York, NY, USA
SUTTA funding source(s)
This work was supported by the NSF CDI program and Abraxis BioScience, LLC.

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