SV-AUTOPILOT specifications


Unique identifier OMICS_18925
Alternative name Structural Variation AUTOmated PIpeLine Optimization Tool
Software type Pipeline/Workflow
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Python
Computer skills Advanced
Stability Stable
Maintained Yes



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Publication for Structural Variation AUTOmated PIpeLine Optimization Tool

SV-AUTOPILOT institution(s)
Sequencing Analysis Support Core, Leiden University Medical Center, Leiden, Netherlands; Center for Bioinformatics, Saarland University, Saarbrücken, Germany; Max Planck Institute for Informatics, Saarbrücken, Germany; Centrum Wiskunde and Informatica, Amsterdam, Netherlands; Animal Breeding and Genomics Centre, Wageningen University, Wageningen, Netherlands; University of Fribourg and Swiss Institute of Bioinformatics, Fribourg, Switzerland; Weizmann Institute of Science, Rehovot, Israel
SV-AUTOPILOT funding source(s)
Supported by EU FP7 ALLBIO project, grant number 289452; the Dutch national e-infrastructure with the support of SURF Foundation; the TraIT project (grant 05 T-401) within the framework of the Center for Translational Molecular Medicine (CTMM); The European Research Council under the European Community’s Seventh Framework Program (FP7/2007-2013)/ERC Grant agreement no 249894 (SelSweep project); the Nederlandse Organisatie voor Wetenschappelijk Onderzoek (NWO), through Vidi grant 639.072.309; and the EU: Cost Action BM1006: NGS Data Analysis Network.


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