SVachra specifications

Information


Unique identifier OMICS_22083
Name SVachra
Alternative name Structural Variation Assesment of CHRomosomal Aberrations
Interface Command line interface
Restrictions to use None
Input data A file of mapped mate pair reads.
Input format BAM
Operating system Unix/Linux
Programming languages Ruby
License MIT License
Computer skills Advanced
Version 1.0
Stability Stable
Requirements
Samtools, getoptlong, fileutils, rubygems, mathn
Maintained Yes

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Maintainer


  • person_outline Olivier Hampton <>

Publication for Structural Variation Assesment of CHRomosomal Aberrations

SVachra institution(s)
Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX, USA; Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, USA; Department of Pediatrics, Baylor College of Medicine, Houston, TX, USA; Texas Children’s Hospital, Houston, TX, USA.
SVachra funding source(s)
Supported in part by grants from the National Human Genome Research Institute (NHGRI) (U54HG003273).

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