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SVelter specifications

Information


Unique identifier OMICS_15676
Name SVelter
Software type Framework/Library
Interface Command line interface
Restrictions to use None
Input data The aligned Illumina paired-end sequence data in sorted BAM format, the reference genome
Output data The predicted SVs
Biological technology Illumina, Pacific Biosciences
Operating system Unix/Linux
License MIT License
Computer skills Advanced
Version 1.1.2
Stability Stable
Requirements
R, Python, Samtools
Maintained Yes

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Documentation


Maintainer


  • person_outline Ryan Mills <>

Publication for SVelter

SVelter institution(s)
Department of Computational Medicine & Bioinformatics, University of Michigan, Ann Arbor, MI, USA; Department of Human Genetics, University of Michigan, Ann Arbor, MI, USA
SVelter funding source(s)
This work was supported in part through funds from the University of Michigan, the NIH/NHGRI (1R01-HG007068-01A1), and NIH/Common Fund (DP5OD009154).

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