SVScore specifications


Unique identifier OMICS_14566
Name SVScore
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data A Variant Call Format (VCF) file
Output data A VCF file with predicted scores
Operating system Unix/Linux
Programming languages Perl
License MIT License
Computer skills Advanced
Version 0.6
Stability Beta
BASH-like shell (sh, cd, sort, cat, zcat, rm, rmdir, diff, echo, chmod, grep, and awk), Perl, vcfanno, svtools, whole_genome_SNVs.tsv.gz (and .tbi), CADD, tabix/bgzip
Maintained Yes


  • Primates
    • Homo sapiens




No version available



  • person_outline Ira Hall

Publication for SVScore

SVScore citation


How Math Anxiety Relates to Number–Space Associations

Front Psychol
PMCID: 5021703
PMID: 27683570
DOI: 10.3389/fpsyg.2016.01401

[…] significantly higher score than women (male MRscore = 14.88; SD = 4.91 vs. female MRscore = 11.96; SD = 5.31). There was no main effect of math anxiety group and no interaction (see Figure ).The mean SVscore across all participants was 3 (SD = 0.64; ranging from 1.47 to 4.27). A two-way ANOVA on SVscore including math anxiety group and gender as between-subject variables did not reveal any main ef […]

SVScore institution(s)
McDonnell Genome Institute, Washington University School of Medicine, St Louis, MO, USA; Department of Medicine, Washington University School of Medicine, St Louis, MO, USA
SVScore funding source(s)
This work was supported by the National Institutes of Health/National Human Genome Research Institute (grant numbers 5U54HG003079, 1UM1HG008853) and a Burroughs Wellcome Fund Career Award.

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