SwimR specifications

Information


Unique identifier OMICS_15851
Name SwimR
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License GNU General Public License version 2.0
Computer skills Advanced
Version 1.18.0
Stability Stable
Requirements
methods, R(>=3.0.0), R2HTML(>=2.2.1), gplots(>=2.10.1), heatmap.plus(>=1.3), signal(>=0.7)
Maintained Yes

Taxon


  • Invertebrates
    • Caenorhabditis elegans

Download


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Versioning


No version available

Documentation


Maintainer


  • person_outline Randy Blakely

SwimR citation

library_books

Forward Genetic Analysis to Identify Determinants of Dopamine Signaling in Caenorhabditis elegans Using Swimming Induced Paralysis

2012
PMCID: 3411251
PMID: 22908044
DOI: 10.1534/g3.112.003533

[…] ters of swimming behavior and subtle fluctuations between mobile and immobile states.Our automated thrashing analysis of vt25 and vt29 revealed striking differences between them and with dat-1. Using SwimR, we observed that fewer vt25 animals fail to paralyze than dat-1 and that vt29 has a shorter latency to paralyze and a lower incidence of Swip reversion from the dat-1 strain. Reversion analysis […]

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