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Citations per year

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Popular tool citations

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SwimR specifications

Information


Unique identifier OMICS_15851
Name SwimR
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License GNU General Public License version 2.0
Computer skills Advanced
Version 1.18.0
Stability Stable
Requirements
methods, R(>=3.0.0), R2HTML(>=2.2.1), gplots(>=2.10.1), heatmap.plus(>=1.3), signal(>=0.7)
Maintained Yes

Taxon


  • Invertebrates
    • Caenorhabditis elegans

Download


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Versioning


No version available

Documentation


Maintainer


  • person_outline Randy Blakely

SwimR citation

library_books

Forward Genetic Analysis to Identify Determinants of Dopamine Signaling in Caenorhabditis elegans Using Swimming Induced Paralysis

2012
PMCID: 3411251
PMID: 22908044
DOI: 10.1534/g3.112.003533

[…] file made for each of the animals to be analyzed. these two files are then used as the input for a custom script written in the free publically available statistical program r. the program (swimr, available upon request) smoothens individual data traces using a specified moving window and identifies any outliers in the sample file using a modified z-score calculation (). swimr […]


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