SWPhylo specifications

Information


Unique identifier OMICS_32226
Name SWPhylo
Interface Web user interface
Restrictions to use None
Input data A genome sequence or a GyrA sequence.
Programming languages Python
Computer skills Basic
Stability Stable
Maintained Yes

Maintainer


  • person_outline Oleg Reva

Publication for SWPhylo

SWPhylo citation

call_split

SWPhylo – A Novel Tool for Phylogenomic Inferences by Comparison of Oligonucleotide Patterns and Integration of Genome Based and Gene Based Phylogenetic Trees

2018
Evol Bioinform Online
PMCID: 5826093
PMID: 29511354
DOI: 10.1177/1176934318759299
call_split See protocol

[…] enomic distances between microorganisms.In addition, sets of artificial DNA sequences of 1 Mb simulating phylogenetic relationships were generated by the SimBac program to test the performance of the SWPhylo program.Topologies of phylogenetic trees were compared using the Symmetric and Branch Score Distance (BSD) algorithms implemented in the program treedist of the PHYLIP package. The symmetric a […]

SWPhylo institution(s)
Department of Biochemistry, Centre for Bioinformatics and Computational Biology, University of Pretoria, Pretoria, South Africa

SWPhylo reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review SWPhylo