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Syapse specifications


Unique identifier OMICS_02092
Name Syapse
Software type Framework/Library
Interface Graphical user interface
Restrictions to use License purchase required
Operating system Unix/Linux
Parallelization MapReduce
Computer skills Medium
Stability Stable
High performance computing Yes
Registration required Yes
Maintained Yes


No version available

Syapse citations


Academic medical centers as innovation ecosystems to address population –omics challenges in precision medicine

J Transl Med
PMCID: 5815198
PMID: 29448963
DOI: 10.1186/s12967-018-1401-2

[…] arge scale enrollments, finding genetic diversity, and legal and regulatory administration.Several for-profit organizations, Paradigm Diagnostics, Flatiron Health, Foundation Medicine, Curis, Tempus, Syapse, and M2Gen, are creating consortia of academic research and medical centers to aggregate clinical cases and create registries, in a manner similar to OREIN, at population scale (with aims to ac […]


Change in Neutrophil to lymphocyte ratio (NLR) in response to immune checkpoint blockade for metastatic renal cell carcinoma

PMCID: 5776777
PMID: 29353553
DOI: 10.1186/s40425-018-0315-0

[…] Genentech, Merck, Novartis, Pfizer, Pierre Fabre; institutional research funding/support from Millenium, Sanofi, MSD Oncology, Pfizer.EMVA: honoraria/consulting from Genome Medical, Novartis, Roche, Syapse, Takeda, Third Rock Ventures; institutional research funding/support from Bristol-Myers Squibb, Novartis.BAM: honoraria/consulting from Astellas, Seattle Genetics, Bayer, Astra-Zeneca, Genentec […]


Integrating cancer genomic data into electronic health records

Genome Med
PMCID: 5081968
PMID: 27784327
DOI: 10.1186/s13073-016-0371-3

[…] idelity results, which can be updated as new knowledge accumulates, and often contain links to primary literature and clinical trials resources. Another class of middleware products is exemplified by Syapse Inc., which produces a “platform” that serves several needs related to cancer genomics: workflow management, including ordering and receiving results; integration of clinical and molecular data […]


Dealing with Data: A Case Study on Information and Data Management Literacy

PLoS Biol
PMCID: 3362643
PMID: 22666180
DOI: 10.1371/journal.pbio.1001339

[…] omplementary approach is to enable researchers to identify the components of their research during the course of research by using laboratory project management software such as Labguru, Quartzy, and Syapse. These applications allow principal investigators to manage different projects, resources, data, inventorying, scheduling, etc. amongst different members of the lab. If these systems became mor […]


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Syapse institution(s)
Five Radnor Corporate Center, Radnor, PA, USA

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