Synergy Maps statistics

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Synergy Maps specifications

Information


Unique identifier OMICS_18216
Name Synergy Maps
Interface Web user interface
Restrictions to use None
Input data Compound data, data associated with their combinations (including calculated synergy metrics).
Input format Structure-Data File (SDF), CSV
Output data Image of the network, positioning nodes according to the precalculated coordinates.
Output format Scalable Vector Graphics (SVG)
Programming languages Javascript, Python
License MIT License
Computer skills Basic
Stability Stable
Requirements
HTML5 capable browser
Maintained Yes

Maintainer


  • person_outline Richard Lewis <>

Information


Unique identifier OMICS_18216
Name Synergy Maps
Software type Package/Module
Interface Graphical user interface
Restrictions to use None
Input data Compound data, data associated with their combinations (including calculated synergy metrics).
Input format Structure-Data File (SDF), CSV
Output data Image of the network, positioning nodes according to the precalculated coordinates.
Output format Scalable Vector Graphics (SVG)
Operating system Unix/Linux, Mac OS, Windows
Programming languages Javascript, Python
License MIT License
Computer skills Medium
Version 1.0
Stability Stable
Requirements
HTML5 capable browser
Source code URL https://zenodo.org/record/45249/files/synergy-maps-v0.1.0.zip
Maintained Yes

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Maintainer


  • person_outline Richard Lewis <>

Publication for Synergy Maps

Synergy Maps in publications

 (3)
PMCID: 3574676
PMID: 23262485
DOI: 10.3390/s130100241

[…] all views into a reference plane, producing a 2-d grid of occupancy likelihoods, which they call a synergy map. they use multiple planes, parallel to the reference plane, and stack the resulting synergy maps into a 3-d volume representing sampled scene space. losada et al. [] use multiple calibrated cameras and 3-d occupancy grid for localization of multiple mobile robots in an intelligent […]

PMCID: 3395329
PMID: 22811914
DOI: 10.1155/2012/832059

[…] doc at a dose level equal to the ec50 (1) value when combined with dox. overall cytotoxicity trends show that du145 is more sensitive to doc and dox single-drug treatments than pc3. , shows the synergy maps of the doc and dox combination, and represents the cytotoxicity of the drug combinations for pc3 and du145., drug synergy and significant cell death (~60%) was seen in pc3 at 104 nm doc […]

PMCID: 3010846
PMID: 20562863
DOI: 10.1038/nbt.1642

[…] interactions were noted also between low and moderate doses of sfllrn and aypgkf. these results suggested a mechanism of synergy between thrombin and thromboxane. to test this, binary synergy maps of the physiological agonist thrombin and u46619 were constructed for donors a and e () over 7 doses spanning the active concentration ranges. to our knowledge, this is the first report […]


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Synergy Maps institution(s)
Department of Chemistry, Centre for Molecular Informatics, University of Cambridge, Cambridge, UK; National Center for Advancing Translational Sciences, Rockville, MD, USA; The Genome Analysis Centre, Norwich Research Park, Norwich, UK; Gut Health and Food Safety Programme, Institute of Food Research, Norwich Research Park, Norwich, UK
Synergy Maps funding source(s)
This work was supported by the EPSRC; by a fellowship in computational biology at The Genome Analysis Centre, in partnership with the Institute of Food Research, and strategically supported by BBSRC; and the European Research Commission for funding (ERC Starting Grant 2013 MIXTURE).

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