Protocols

SynPAnal specifications

Information


Unique identifier OMICS_29559
Name SynPAnal
Software type Application/Script
Interface Graphical user interface
Restrictions to use Academic or non-commercial use
Input data 8-bits images.
Input format TIFF, JPEG, GIF
Operating system Unix/Linux, Mac OS, Windows
Programming languages Java
Computer skills Medium
Stability Stable
Requirements
JRE
Maintained Yes

Download


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Versioning


No version available

Documentation


Maintainer


  • person_outline Sang Lee

Publications for SynPAnal

SynPAnal citation

call_split

Actin Waves Do Not Boost Neurite Outgrowth in the Early Stages of Neuron Maturation

2017
PMCID: 5741660
PMID: 29326552
DOI: 10.3389/fncel.2017.00402
call_split See protocol

[…] Ws and GCs, in the rear and front halves of the AWs, and in two neurite sections of the same area for each AW (8–12 μm2) immediately before and after the AWs. The areas were then analyzed through the SynPAnal software (Danielson and Lee, ) to detect the puncta density in the areas of interest. In the same regions, the actin mean intensity was calculated using an ImageJ software, and the resulting […]

SynPAnal institution(s)
Department of Pharmacology and Toxicology, Medical College of Wisconsin, Milwaukee, WI, USA; Neuroscience Research Center, Medical College of Wisconsin, Milwaukee, WI, USA
SynPAnal funding source(s)
Supported by the NIH grant MH078135 and by funding provided through the Research and Education Program, a component of the Advancing a Healthier Wisconsin endowment at the Medical College of Wisconsin.

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