SynTView pipeline

SynTView specifications

Information


Unique identifier OMICS_01500
Name SynTView
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
License GNU Lesser General Public License version 3.0
Computer skills Advanced
Stability Stable
Requirements AdobeW Flash Player
Maintained Yes

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Documentation


Maintainer


  • person_outline Pierre Lechat <>

Additional information


http://hub18.hosting.pasteur.fr/SynTView/GetStarted/ http://hub18.hosting.pasteur.fr/SynTView/documentation/

Publication for SynTView

SynTView IN pipelines

 (2)
2014
PMCID: 3977354
PMID: 24667708
DOI: 10.1128/mBio.00969-14

[…] 10403s, and the sequence was submitted to the ena database (accession number hg421741). interactive visualization of the syntenic organization of listeria genomes is available with the flash-based syntview (77) software available at http://genopole.pasteur.fr/syntview/flash/listeria_monocytogenes/synwebegd_final.html., bacterial overnight cultures were diluted in bhi, and bacteria were grown […]

2014
PMCID: 3977354
PMID: 24667708
DOI: 10.1128/mBio.00969-14

[…] number hg421741). interactive visualization of the syntenic organization of listeria genomes is available with the flash-based syntview (77) software available at http://genopole.pasteur.fr/syntview/flash/listeria_monocytogenes/synwebegd_final.html., bacterial overnight cultures were diluted in bhi, and bacteria were grown to an od of 1. rna was extracted and samples for each chip […]

SynTView institution(s)
Institut Pasteur, Plate-forme Bioanalyse Génomique, Paris, France
SynTView funding source(s)
Supported by Institut Pasteur and grants from the Région Ile-de-France (DIM Malinf), the Agence Nationale de la Recherche (ANR-08-GENM-027) and the French Government’s Investissements d’Avenir program (Laboratoire d’Excellence “Integrative Biology of Emerging Infectious Diseases” - ANR-10-LABX-62-IBEID).

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