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SysGenSIM specifications


Unique identifier OMICS_17701
Name SysGenSIM
Software type Toolkit/Suite
Interface Graphical user interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages MATLAB
License GNU General Public License version 2.0
Computer skills Medium
Version 1.2
Stability Stable
Maintained Yes




No version available


Additional information


Publication for SysGenSIM

SysGenSIM citation


An Information Theoretic Machine Learning Approach to Expression QTL Analysis

PMCID: 3692482
PMID: 23825689
DOI: 10.1371/journal.pone.0067899

[…] stab2, 2010111i01rik and sptlc1. the eqtl results provided useful clues about the functions of predicted genes, gm13803 and gm19516., we generated simulated genotype and gene expression data using sysgensim . the parameters used in the simulation are as following: population size with 250, size of genes/snps with1000, network topology with small-world, and average degree of node with 10. […]

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SysGenSIM institution(s)
CRS4 Bioinformatica, Pula, Italy; Department of Statistics, Virginia Polytechnic Institute and State University, Blacksburg, VA, USA; Virginia Bioinformatics Institute, Virginia Polytechnic Institute and State University, Blacksburg, VA, USA
SysGenSIM funding source(s)
Supported by Regional Authorities of Sardinia and National Institutes of Health grant (1R01HG005254-01).

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