T-BioInfo specifications

Information


Unique identifier OMICS_26724
Name T-BioInfo
Interface Web user interface
Restrictions to use Academic or non-commercial use
Input data Some raw transcriptomic, genomic, epigenetic, mass-spec or structural data.
Input format FastQ,FASTA,CSV
Output data Processed or analysed data.
Output format CSV,TXT,VCF
Biological technology Illumina, Life Technologies, Pacific Biosciences, Roche, Affymetrix
Programming languages C++, R, Ruby
Computer skills Basic
Stability Beta
Registration required Yes
Maintained Yes

Taxon


  • Primates
    • Homo sapiens
  • Rodents
    • Mus musculus
    • Rattus norvegicus
  • Viruses
    • Ebola virus
    • Hepatitis B virus
    • Hepatitis C virus genotype 2
    • Hepatitis C virus genotype 3
    • Hepatitis C virus genotype 4
    • Human immunodeficiency virus 1
    • Human immunodeficiency virus 2
    • Human papillomavirus
    • Influenza A virus
    • Influenza A virus (A/Puerto Rico/8/1934(H1N1))
    • Influenza B virus

Documentation


Maintainer


T-BioInfo institution(s)
University of Haifa, Israel Pine Biotech, Haifa, Israel

T-BioInfo review

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Sahil Sethi

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Web
This tool is quite useful for people who don't have any prior knowledge to coding and won't have sufficient time to design the pipelines from the scratch. Quite informative and ready to use pipelines. The basics of these pipelines are explained in a nice and lucid way at edu.t-bio.info