T-CUP specifications

Information


Unique identifier OMICS_12140
Name T-CUP
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License GNU General Public License version 3.0
Computer skills Advanced
Version 2.0
Stability Stable
Maintained Yes

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Maintainer


  • person_outline Dominik Heider <>

Publication for T-CUP

T-CUP in publications

 (10)
PMCID: 5797423
PMID: 29434543
DOI: 10.3389/fnhum.2018.00007

[…] (wasi; wechsler, ) to assess iq. socioeconomic status (ses) was measured by two items from the family affluence scale (fas; currie et al., ) on housing tenure and room occupancy. a 10 panel t-cup urine test was used to test for substance abuse and participants who tested positive for any of the 10 substances were excluded from taking part. other exclusion criteria were left-handedness, […]

PMCID: 5708742
PMID: 29190830
DOI: 10.1371/journal.pone.0188744

[…] and sexual abuse and emotional and physical neglect. socioeconomic status (ses) was measured by two items from the family affluence scale (fas) [] on housing tenure and room occupancy., a 10 panel t-cup urine test (http://www.testfield.co.uk) was used to test for substance abuse. participants who tested positive for any of the 10 substances were excluded resulting in the exclusion of 4 […]

PMCID: 5649092
PMID: 28845020
DOI: 10.1262/jrd.2016-093

[…] and spermiogenesis using in situ hybridization showed that the transcript number for hale-bopp (hale), schumacher-levy (schuy), davis-cup (d-cup), presidents-cup (p-cup), tetleys-cup (t-cup), flyer-cup (f-cup), sungrazer (sunz), and other genes in elongated spermatids was significantly higher than that of in round spermatids. in addition, the transcript number for these genes […]

PMCID: 5310022
PMID: 28196510
DOI: 10.1186/s12985-017-0703-y

[…] inexpensive genotyping sequence analysis that however, suffer from reduced sensitivity []. to improve robustness of genotypic tropism assignments, a number of tools have been developed including t-cup 2.0, webpssmx4r5, webpssmsinsi and geno2pheno, as well as rule-based methods like esbjörnsson rule and raymond’s rule with the objective of expanding the scope of sensitivity to include […]

PMCID: 5104469
PMID: 27832090
DOI: 10.1371/journal.pone.0165547

[…] learning disability, neurological abnormalities, epilepsy, iq < 70 and mri contraindications. urine screening for recent drug use was conducted with 10-panel urine drug test integrated cups (t-cup; http://www.testfield.co.uk). all participants or their guardians if the participant was under the age of 18, provided written informed consent to participate in the study. young people […]


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T-CUP institution(s)
Research Group Bioinformatics, Center of Medical Biotechnology, University of Duisburg-Essen, Essen, Germany
T-CUP funding source(s)
This work was supported by Deutsche Forschungsgemeinschaft, project TRR60/A6.

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