TACO specifications

Information


Unique identifier OMICS_17372
Name TACO
Alternative name Transcriptome Assemblies Combined into One
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data Any assembly
Input format GTF
Output data Details on overlap with reference transcript and nature of that overlap.
Operating system Unix/Linux, Mac OS
Programming languages C++
Computer skills Advanced
Version 0.7.0
Stability Stable
Source code URL https://codeload.github.com/tacorna/taco/tar.gz/v0.7.0
Maintained Yes

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Maintainer


  • person_outline Yashar Niknafs <>

Additional information


https://github.com/tacorna/taco/

Publication for Transcriptome Assemblies Combined into One

TACO institution(s)
Michigan Center for Translational Pathology, University of Michigan, Ann Arbor, MI, USA; Department of Cellular and Molecular Biology, University of Michigan, Ann Arbor, MI, USA; Department of Statistics, Colorado State University, Fort Collins, CO, USA; Department of Pathology, University of Michigan, Ann Arbor, MI, USA; Howard Hughes Medical Institute, University of Michigan, Ann Arbor, MI, USA; Comprehensive Cancer Center, University of Michigan, Ann Arbor, MI, USA; Department of Urology, University of Michigan, Ann Arbor, MI, USA
TACO funding source(s)
This work was supported in part by the NIH Prostate Specialized Program of Research Excellence grant P50CA186786, F30 CA 200328, U01CA214170, U24 CA210967 and by the Prostate Cancer Foundation and the Howard Hughes Medical Institute.

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