TADbit specifications

Information


Unique identifier OMICS_11390
Name TADbit
Software type Pipeline/Workflow
Interface Command line interface
Restrictions to use None
Input data TADbit takes as input the sequencing reads of 3C-based experiments.
Operating system Unix/Linux
Programming languages Python
License GNU General Public License version 3.0
Computer skills Advanced
Version 0.2.51
Stability Stable
Maintained Yes

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Documentation


Maintainers


  • person_outline Guillaume Filion <>
  • person_outline Marc Marti-Renom <>

Additional information


http://3dgenomes.github.io/TADbit/

Publications for TADbit

TADbit institution(s)
CNAG-CRG, Centre for Genomic Regulation (CRG), Barcelona Institute of Science and Technology (BIST), Barcelona, Spain; Gene Regulation, Stem Cells and Cancer Program, Centre for Genomic Regulation (CRG), Barcelona, Spain; Universitat Pompeu Fabra (UPF), Barcelona, Spain; ICREA, Barcelona, Spain
TADbit funding source(s)
Supported by the European Research Council under the European Union’s Seventh Framework Programme (FP7/2007-2013) / ERC grant agreement 609989, the Spanish Ministry of Economy and Competitiveness (BFU2013-47736- P) and the Human Frontiers Science Program (RGP0044) and the Spanish Ministry of Economy and Competitiveness, ‘Centro de Excelencia Severo Ochoa 2013-2017’, SEV-2012-0208 to the CRG.

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