TaLasso specifications

Information


Unique identifier OMICS_00417
Name TaLasso
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages MATLAB, R
Computer skills Advanced
Stability No
Maintained No

Versioning


No version available

Information


Unique identifier OMICS_00417
Name TaLasso
Interface Web user interface
Restrictions to use None
Programming languages MATLAB, R
Computer skills Basic
Stability No
Maintained No

Publication for TaLasso

TaLasso citation

library_books

Novel Modeling of Combinatorial miRNA Targeting Identifies SNP with Potential Role in Bone Density

2012
PLoS Comput Biol
PMCID: 3527281
PMID: 23284279
DOI: 10.1371/journal.pcbi.1002830

[…] mation. The prior information is provided in binary form (putative targets/non-targets) and the effect of multiple miRNAs on a given mRNA is inferred using an expectation maximization (EM) algorithm. TaLasso , a recently published algorithm, combines miRNA expression with prior database information to infer regulation of mRNAs from a set of miRNAs using a lasso regression method to determine the a […]

TaLasso institution(s)
Group of Bioinformatics, CEIT and TECNUN, University of Navarra, San Sebastian, Spain

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