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OMIC
06397

Targetfinder

Predicts small RNA targets in a sequence database using a plant-based scoring metric. Deep sequencing and computational methods are used to identify, profile and analyze non-conserved MIRNA genes in Arabidopsis thaliana.

Specifications

Interface:
Web user interface
Restrictions to use:
None
Computer skills:
Basic
Stability:
Stable
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Publications

  • (Fahlgren et al., 2007) High-throughput sequencing of Arabidopsis microRNAs: evidence for frequent birth and death of MIRNA genes. PloS one.
    PMID: 17299599

Classification

  • Plants

Literature

  • (Akhtar et al., 2016) Bioinformatic tools for microRNA dissection. Nucleic acids research.
    PMID: 26578605

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