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|Alternative name||Threading/ ASSembly/Refinement Lite|
|Interface||Web user interface|
|Restrictions to use||Academic or non-commercial use|
|Input data||A protein sequence.|
- person_outline Jeffrey Skolnick
Publications for Threading/ ASSembly/Refinement Lite
Developing eThread Pipeline Using SAGA Pilot Abstraction for Large Scale Structural Bioinformatics
[…] quired for the prediction of secondary structure that is a preprocessing task for THREADER. We summarize the ten tools in . While three-dimensional structures can be constructed by either MODELLER or TASSER-Lite using the output from eThread metathreading analysis, in this work, we only confine our focus on the metathreading analysis. The effective combination of multiple algorithms considerably e […]
Targeting Protein Protein Interactions for Parasite Control
[…] of the peripheral stalk on F-ATPase. O01427 is considered a druggable domain by Hopkins criteria and has two deletions relative to vertebrate homologs which were modeled for further characterization.TASSER-Lite was used to create the homology model because an ab initio approach was needed to model unresolved structure of the variable-length N-terminal end where the indels were located. The longes […]
aes, the gene encoding the esterase B in Escherichia coli, is a powerful phylogenetic marker of the species
[…] Modelling of the Aes protein structure was based on comparison of the available models from MODBASE  with models previously obtained using the Tasser-Lite homology modelling server [,]. Although some differences were observed between the models obtained by these two independent approaches, in particular in the N terminus region, the best mod […]
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