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Protocols

TCMID specifications

Information


Unique identifier OMICS_09545
Name TCMID
Alternative name Traditional Chinese Medicine Integrated Database
Restrictions to use None
Community driven No
Data access File download, Browse
User data submission Not allowed
Version 2.0
Maintained Yes

Maintainers


  • person_outline Tieliu Shi
  • person_outline Chengping Wen

Additional information


http://www.megabionet.org/tcmid/help/

Publications for Traditional Chinese Medicine Integrated Database

TCMID citations

 (13)
library_books

Screening for the anti inflammation quality markers of Xiaojin Pills based on HPLC MS/MS method, COX 2 inhibition test and protein interaction network

2018
Sci Rep
PMCID: 5945850
PMID: 29748583
DOI: 10.1038/s41598-018-25582-7

[…] of the anti-inflammatory markers were excavated and the target information of candidate components were derived from STITCH (http://stitch.em-bl.de/), BATMAN-TCM (http://bionet.ncpsb.org/batman-tcm), TCMID (https://omictools.com/traditio), TCMSP (http://ibts.hkbu.edu.hk/LSP/tc) and ChEMBL (https://www.ebi.ac.uk/chembl/). STITCH database could generate a score for each component target relationship […]

library_books

Uncovering the anticancer mechanism of Compound Kushen Injection against HCC by integrating quantitative analysis, network analysis and experimental validation

2018
Sci Rep
PMCID: 5766629
PMID: 29330507
DOI: 10.1038/s41598-017-18325-7

[…] cology is a useful approach to investigate the mechanisms of TCM. Generally, in previous studies, all ingredients of herbs were collected from herb databases, such as TCMSP, TCM [email protected] Taiwan, and TCMID. In some cases, the ingredients were filtered according to ADMET properties or drug-likeness value,. However, few studies have focused on the main active compounds of TCM via network pharmacolog […]

library_books

Network pharmacology based validation of TAMS/CXCL 1 as key mediator of XIAOPI formula preventing breast cancer development and metastasis

2017
Sci Rep
PMCID: 5674025
PMID: 29109519
DOI: 10.1038/s41598-017-15030-3

[…] lected from TCM databases, including the Traditional Chinese Medicine Systems Pharmacology (TCMSP) Database (http://lsp.nwsuaf.edu.cn/tcmsp.php), the Traditional Chinese Medicine Integrated Database (TCMID, http://www.megabionet.org/tcmid/) and the BATMAN-TCM (http://bionet.ncpsb.org/batman-tcm/). The ingredients were screened according to drug-likeness (DL) and oral bioavailability (OB) values, a […]

library_books

Quantitative and Systems Pharmacology 3. Network Based Identification of New Targets for Natural Products Enables Potential Uses in Aging Associated Disorders

2017
Front Pharmacol
PMCID: 5651538
PMID: 29093681
DOI: 10.3389/fphar.2017.00747

[…] ural products from six publically available natural product-related data sources: traditional Chinese medicine database (TCMDb) (He et al., ), Chinese natural product database (CNPD) (Shen et al., ), traditional Chinese medicine integrated database (TCMID) (Xue et al., ), traditional Chinese medicine systems pharmacology (TCMSP) (Ru et al., ), traditional Chinese medicine [email protected] ([email protected] […]

library_books

Computational Investigation into the Interactions of Traditional Chinese Medicine Molecules of WenQingYin with GluR2

2017
Int J Mol Sci
PMCID: 5535934
PMID: 28678159
DOI: 10.3390/ijms18071443

[…] cleft of the ligand-binding domain of cerbinal–GluR2 opens readily and allows the drug to leave easily. Based on this, we infer that cerbinal is not an antagonist for GluR2 in WenQingYin.According to TCMID [], there are a series of related drugs that have experimental and effective data associated with GluR2. Previous studies utilized a computational approach to determine the interactions of drugs […]

library_books

Systems Pharmacology‐Based Discovery of Natural Products for Precision Oncology Through Targeting Cancer Mutated Genes

2017
PMCID: 5356618
PMID: 28294568
DOI: 10.1002/psp4.12172

[…] for natural products by integrating data from six data sources, including a traditional Chinese medicine database, Chinese natural product database, traditional Chinese medicine integrated database (TCMID), traditional Chinese medicine systems pharmacology (TCMSP), traditional Chinese medicine [email protected] ([email protected]), and universal natural product database (UNPD). For each database, drug str […]

Citations

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TCMID institution(s)
TCM Clinical Basis Institute, Zhejiang Chinese Medicine University, Zhejiang, China; The Center for Bioinformatics and Computational Biology, Shanghai Key Laboratory of Regulatory Biology, the Institute of Biomedical Sciences and School of Life Sciences, East China Normal University, Shanghai, China
TCMID funding source(s)
Supported by National Natural Science Foundation of China [81373633]; National High Technology Research and Development Program of China [2015AA020108]; Special Scientific Project of Traditional Chinese Medicine [201507001-4]; Major Special Science and Technology Project of Zhejiang Province [2014C03046-1]; 111 Project [B14019].

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